PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_15752
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 109aa    MW: 12534 Da    PI: 10.687
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_15752genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.12.9e-201058355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                y+GVr+++ +g+W+AeIrdp+    r  r +lg+f taeeAa+a++ a+ +++g
  PEQU_15752 10 YRGVRRRP-WGKWAAEIRDPR----RaVRKWLGTFNTAEEAARAYDLAAIEFRG 58
                9*******.**********82....48************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.0E-14958IPR001471AP2/ERF domain
CDDcd000182.04E-29966No hitNo description
SuperFamilySSF541711.44E-23967IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.0E-31966IPR001471AP2/ERF domain
PROSITE profilePS5103225.778966IPR001471AP2/ERF domain
SMARTSM003802.4E-37972IPR001471AP2/ERF domain
PRINTSPR003671.3E-111021IPR001471AP2/ERF domain
PRINTSPR003671.3E-113248IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    Send to blast
RSRRKKSNNY RGVRRRPWGK WAAEIRDPRR AVRKWLGTFN TAEEAARAYD LAAIEFRGRR  60
AKLNFPFQNS DASSSSGRQD MGMASPTVVS EGEEIGEFWE GLQDLIEID
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-21668265ATERF1
3gcc_A1e-21668265ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010939424.13e-42PREDICTED: ethylene-responsive transcription factor ERF071-like
SwissprotP427367e-31RAP23_ARATH; Ethylene-responsive transcription factor RAP2-3
TrEMBLM0YCX64e-39M0YCX6_HORVD; Uncharacterized protein
STRINGMLOC_67996.11e-38(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP124236124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.11e-23ethylene-responsive element binding protein